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    • Computational chemistry programs require scientists to specify two things in order to run an input file:
      1. Basis Set
      2. Cartesian Coordinates
    • It is important for scientist to identify the correct molecular geometry because small changes in geometry cause large changes in the molecular energy.
    • There are three methods that scientists use to calculate molecular geometries:
      1. Calculate cartesian coordinates by hand (only works for small molecules)
      2. Graphical User Interfaces (GUI) programs that calculate the geometry for the users.
      3. Z-Matrices - converts the bond angles, bond lengths, and dihedrals of each atom into cartesian coordinates
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